Quickstart

Installation

Install using pip:

pip install barbet

Usage

See the options for making inferences with the command:

barbet --help

Run

barbet --input GCA_000006945.2.fna --output-dir outputs

Or using the large model:

barbet --input GCA_000006945.2.fna --output-dir outputs-large --large

Training

You can train the model on releases from GTDB or your own custom dataset. See the instructions in the documentation for preprocessing and training.